Personal site and technical notebook
Writing about algorithms, systems, implementation details, and the parts of software work worth keeping around.
Latest posts
Projects, technical ideas, and implementation notes.
I am fascinated by the concept of Monte-Carlo simulation: you can, in principle, simulate random events and see how these simulations differ from reality (on a small scale, at least!)
Here I would like to show a couple of simple probability theory textbook problems and my attempt at simulating …
In this quick tutorial, I will share how to install Julia language on a Mac computer, setup symlinks to run it from command line and then will go through a couple of problems in probability and their Julia language simulations.
We are going to install …
In this post I will present a tutorial on a Julia package called StructuralIdentifiability.jl which I help maintain and contribute to. In the next post I will present a similar introduction to another package I help develop called SIAN.jl, but that's for another time.
This tutorial will be …
Over the course of the summer, my work resulted in successfully ported code of
StructuralIdentifiability.jl, a package that can help researchers who use
ordinary differential equations in their work. The package allows answering
queries about individual identifiability of parameters and their combinations.
The StructuralIdentifiability.jl package is ready to …
We slightly churned our project idea from the original algorithm implementation into an inclusion of a StructuralIdentifiability.jl package develop by my colleague Gleb Pogudin. The package is currently part of SciML with more updates to come!
Here is a list of things it can do:
The problem of parameter identifiability is one of the most crucial issues arising in systems biology. To take a look at a problem of identifiability, we must first describe a setting in which it arises. Systems biology deals with biological processes that are described by …